Welcome to Chubacapp’s documentation!

Usefull tools for image mosaics analysis and faunal annotation processing, as part of a complete process pipeline to treat underwater imaging transects. A methodological paper is in preparation, and will be added here after publishing.

Contents:

• Installation
  • Anaconda
  • Installation
• Using the app
  • Launching
  • Preprocessing
  • Removing blur
  • Disjoint image selection
  • Biigle interfacing
  • Deep Learning
  • Annotation conversion
  • 3D annotations plotting
  • Post-reprojection
  • Topographic metrics
  • Quick guide to Matisse3D outputs and the sfm_data files
  • For developers
• The complete pipeline
  • Why 3D annotations?
  • What you will need :
  • Constructing the 3D model
  • Get your disjoint images for annotation
  • Annotate your images using Biigle
  • Reproject
  • Enjoy your 3D annotations !

Indices and tables

• Index

• Module Index